Re: [Freesurfer] Custom ROI surface visualization

2014-07-22 Thread Buckley, Shannon
Hi Ruopeng, I just used the GUI while trying to figure this out... Was going to circle back to build a proper cmd line once I have the pieces I need. I was wondering if maybe my commands to build the annotation were faulty, but if it's just the version at issue then that's not so bad... In any

Re: [Freesurfer] Custom ROI surface visualization

2014-07-22 Thread Buckley, Shannon
Aha Tksurfer, of course! Will follow up with Ruopeng about freeview, but tksurfer satisfies the goal nicely... Thank you! On Jul 22, 2014, at 7:53 AM, "Bruce Fischl" wrote: Hi Shannon not sure about freeview, Ruopeng should be able to answer that part, but it should be easy enough in tks

Re: [Freesurfer] Custom ROI surface visualization

2014-07-22 Thread Ruopeng Wang
Hi Shannon, If I understand correctly, you are trying to load 2 ROIs on top of a layer of annotations on surface? Can you show me the freeview command you run? Or did you do everything on the GUI? BTW, are you using the latest dev build of freeview or the released one in v5.3? If I remember cor

Re: [Freesurfer] Custom ROI surface visualization

2014-07-22 Thread Bruce Fischl
Hi Shannon not sure about freeview, Ruopeng should be able to answer that part, but it should be easy enough in tksurfer. Just load the labels separately and give them whatever color you want. cheers Bruce On Mon, 21 Jul 2014, Shannon Buckley wrote: Hi experts,   I’m trying to create a