Re: [Freesurfer] Curvature in FreeSurfer

2017-08-18 Thread Rudolph Pienaar
> b) yes, it means that the fold is "sharper" at least in one direction > I want to underscore Bruce's point. Higher mean curvature could mean that folds are sharper. It does not mean that there are necessarily more folds. -- Rudolph Pienaar, Dr.Eng / email: rudo...@nmr.mgh.harvard.edu MGH/MI

Re: [Freesurfer] Curvature in FreeSurfer

2017-08-18 Thread Bruce Fischl
--- Original Message ---- Subject: Re: [Freesurfer] Curvature in FreeSurfer Local Time: August 16, 2017 4:13 PM UTC Time: August 16, 2017 2:13 PM From: fis...@nmr.mgh.harvard.edu To: Kasper Jessen , Freesurfer support list Hi Kaspar if you mean the values we store in the ?h.curv files, those are th

Re: [Freesurfer] Curvature in FreeSurfer

2017-08-17 Thread Kasper Jessen
Sent with [ProtonMail](https://protonmail.com) Secure Email. > Original Message ---- > Subject: Re: [Freesurfer] Curvature in FreeSurfer > Local Time: August 16, 2017 4:13 PM > UTC Time: August 16, 2017 2:13 PM > From: fis...@nmr.mgh.harvard.edu > To: Kasper Jess

Re: [Freesurfer] Curvature in FreeSurfer

2017-08-16 Thread Rudolph Pienaar
Curvature does not really connect simply to folding, although they are of course related. Nonetheless, one cannot make universal statements like "A curvature means an in folding". Consider for example a pathology like poly-microgryria where numerous small "bumps" might appear on a brain surf

Re: [Freesurfer] Curvature in FreeSurfer

2017-08-16 Thread Bruce Fischl
Hi Kaspar if you mean the values we store in the ?h.curv files, those are the spatially smoothed mean curvature (average of the two principal curvatures). a). it is of the white surface, but you can use mris_curvature to compute the curv of the pial if you want b) an increase in the curva