Re: [Freesurfer] Creating a label from overlapping cluster results

2019-12-20 Thread Greve, Douglas N.,Ph.D.
There is a script called labels_intersect. I have not run it before, but the name would indicate that it would do the right thing On 12/19/2019 9:49 AM, Bruce Fischl wrote: Hi Cody not sure we have a binary for this, but it would be about 5 lines of matlab code cheers Bruce On Thu, 19 Dec 2019,

Re: [Freesurfer] Creating a label from overlapping cluster results

2019-12-19 Thread Bruce Fischl
Hi Cody not sure we have a binary for this, but it would be about 5 lines of matlab code cheers Bruce On Thu, 19 Dec 2019, cody samth wrote: External Email - Use Caution Hi, I was wondering if there is any automated command/method to create a new label that consists of the

Re: [Freesurfer] Creating a label from an .mgh file

2012-06-08 Thread Douglas N Greve
locations aren't correct (they don't > correspond to where clusters exist on the original volume). > > Any help would be appreciated. >> Message: 13 >> Date: Wed, 06 Jun 2012 18:04:56 -0400 >> From: Douglas Greve >> Subject: Re: [Freesurfer] Creating a lab

Re: [Freesurfer] Creating a label from an .mgh file

2012-06-08 Thread Ilia
esults in yellow specks showing up on the brain surface, but the spatial locations aren't correct (they don't correspond to where clusters exist on the original volume). Any help would be appreciated. > Message: 13 > Date: Wed, 06 Jun 2012 18:04:56 -0400 > From: Douglas Greve &g

Re: [Freesurfer] Creating a label from an .mgh file

2012-06-06 Thread Douglas Greve
you can use mri_cor2label, eg, for cluster #2, something like mri_cor2label --id 2 --i cluster.mgh --o cluster2.label doug On 6/6/12 4:22 PM, Ilia wrote: > Hello, > > How would one create a label (to be used as an input for > "mris_anatomical_stats") based on a a statistical map generated by qde

Re: [Freesurfer] Creating a label

2010-07-22 Thread Douglas N Greve
This is something that happens when you go back and forth between the volume and the surface (ie, it is not necessarily reversible). It is better to stay within the surface if you can. doug liang wang wrote: > Hi, > > I can create a label file from either ?h.aparc.annot (using > mri_annotation