Re: [Freesurfer] A question about cortical foldings

2009-05-29 Thread Nick Schmansky
To get Rudolph's curv stats in the current freesurfer version, you'll need to run this: recon-all -s subjid -curvstats (or add the -curvstats after -all if you havent processed your subjects yet). It only takes a minute to run. N. On Fri, 2009-05-29 at 10:37 -0400, Rudolph Pienaar wrote: > The

Re: [Freesurfer] A question about cortical foldings

2009-05-29 Thread Rudolph Pienaar
The current version of Freesurfer calculates numerous curvature-based functions by default in the recon stream. If you look in the "surf" directory for a reconstructed surface, you'll see several "curvature" files that end in "*.crv". By default, these are created for the gray/white junction surf

Re: [Freesurfer] A question about cortical foldings

2009-05-29 Thread Allison Stevens
You can find this information in: /stats/?h.aparc.stats Allison -- On Fri, 29 May 2009, Zhangyuanchao wrote: Dear Mr or Ms     Is there any way that we can obtain curvature value of the pial surface? I am not sure whether lh.curv is the curvature file that I want. How can I calculate the me