22 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] 7T recon
>
> Ah ok, thanks Bruce.
>
> Matt
>
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl
&g
urfer-boun...@nmr.mgh.harvard.edu
[freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Kevin Aquino
[aqu...@physics.usyd.edu.au]
Sent: Wednesday, June 07, 2017 10:50 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] 7T recon {Disarmed}
Does adding control points help?
> suggestions?
>
> Thanks,
> Matt
>
> From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.
> harvard.edu] on behalf of Hibert, Matthew Louis [mhib...@mgh.harvard.edu]
> Sent: Tuesday, June 06, 2017 5:22 PM
> To: Freesurfer
r-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl
> [fis...@nmr.mgh.harvard.edu]
> Sent: Friday, May 26, 2017 1:57 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] 7T recon
>
> yes, and autorecon3
> On Fri, 26 May 2017, Hibert, Matthew Louis wrote:
>
>> Thanks Bruce
rd.edu] on behalf of Bruce Fischl
> [fis...@nmr.mgh.harvard.edu]
> Sent: Friday, May 26, 2017 1:57 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] 7T recon
>
> yes, and autorecon3
> On Fri, 26 May 2017, Hibert, Matthew Louis wrote:
>
>> Thanks Bruce.
behalf of Bruce Fischl
[fis...@nmr.mgh.harvard.edu]
Sent: Friday, May 26, 2017 1:57 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] 7T recon
yes, and autorecon3
On Fri, 26 May 2017, Hibert, Matthew Louis wrote:
> Thanks Bruce. After I remove the problem voxels in wm.mgz, do I then r
.@nmr.mgh.harvard.edu
> [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl
> [fis...@nmr.mgh.harvard.edu]
> Sent: Friday, May 26, 2017 1:40 PM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] 7T recon
>
> Hi Matt
>
> yes, that means there was a topolog
...@nmr.mgh.harvard.edu]
Sent: Friday, May 26, 2017 1:40 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] 7T recon
Hi Matt
yes, that means there was a topological defect that was incorrectly
fixed. If you load the wm.mgz over the lh.orig.nofix, then in the
orig.nofix load the file defect_labels as an
Hi Matt
yes, that means there was a topological defect that was incorrectly
fixed. If you load the wm.mgz over the lh.orig.nofix, then in the
orig.nofix load the file defect_labels as an overlay and change the overlay
settings to that the min is 1 and click the "use overlay color" button it
w
