RE: [Freesurfer] 3T problems

2006-04-30 Thread Fornito, Alexander
: Fornito, Alexander Cc: Bruce Fischl; freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] 3T problems Did you look at the raw data to make sure there were no artifacts? Fornito, Alexander wrote: >Hi Bruce, >It doesn't look good; actually, I can't see anything when I load it

Re: [Freesurfer] 3T problems

2006-04-28 Thread Doug Greve
rd.edu Subject: Re: [Freesurfer] 3T problems did you check the talairach? On Fri, 28 Apr 2006, Fornito, Alexander wrote: Hi, I'm trying to segment some Siemens 3T images (200x200x256; 1mm3) and have encountered some problems at autorecon1 - the normalization seems to label some o

RE: [Freesurfer] 3T problems

2006-04-28 Thread Jenni Pacheco
the green surface outline. Jenni -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Fornito, Alexander Sent: Friday, April 28, 2006 1:54 AM To: Bruce Fischl Cc: freesurfer@nmr.mgh.harvard.edu Subject: RE: [Freesurfer] 3T problems Hi Bruce, It doesn&#

RE: [Freesurfer] 3T problems

2006-04-27 Thread Fornito, Alexander
: +61 3 9348 0469 email: [EMAIL PROTECTED] -Original Message- From: Bruce Fischl [mailto:[EMAIL PROTECTED] Sent: Fri 4/28/2006 1:35 PM To: Fornito, Alexander Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] 3T problems did you check the talairach? On Fri, 28 Apr 2006, Forn

Re: [Freesurfer] 3T problems

2006-04-27 Thread Bruce Fischl
did you check the talairach? On Fri, 28 Apr 2006, Fornito, Alexander wrote: Hi, I'm trying to segment some Siemens 3T images (200x200x256; 1mm3) and have encountered some problems at autorecon1 - the normalization seems to label some of the background as white matter. Needless to say, the skul