Re: [Freesurfer] volume and mean value of a custom made white matter ROI

2013-05-30 Thread Douglas N Greve
Hi Subha, use mri_segstats, something like mri_segstats --i norm.mgz -seg arcfas.mgz -id 1 -sum arcfas.summary.dat Look at the --help for more info doug On 05/30/2013 07:04 AM, Subhabrata Chaudhury wrote: > Hello Everyone, > Greetings. > I am learning freesurfer tricks. I am stuck and have a que

[Freesurfer] volume and mean value of a custom made white matter ROI

2013-05-30 Thread Subhabrata Chaudhury
Hello Everyone, Greetings. I am learning freesurfer tricks. I am stuck and have a question. I have run 10 subjects through freesurfer. I have made custom volume regions for arcuate fasciculus for 10 subjects. Now I want to get some measurements inside this region. How do I get the volume of