Hi David
it works fine for me. The infinte loop happened when the brainmask was
completely empty I believe, although we fixed it in any case. Can you check
the brainmask? I can also send you an updated mri_cc if you want
cheers
Bruce
On Mon, 12 Oct
2015, Slater David wrote:
Hi Bruce,
linear and
> nonlinear registration worked correctly.
>
> Peace,
>
> Matt.
>
> From: Dawei Liu
> Date: Wednesday, February 20, 2013 10:49 AM
> To:
> Subject: [Freesurfer] unusually long running time in autorecon2
>
> Dear Freesurfer experts,
>
>
>
&g
urfer] unusually long running time in autorecon2
Dear Freesurfer experts,
I am running autorecon2 using Freesurfer verion 5.1.0 on Linux. For some
subjects, it looks that the pipeline stucked in the middle of mri_cc and
keeps running for days (without any error message). Last time when it
occur
Dear Freesurfer experts,
I am running autorecon2 using Freesurfer verion 5.1.0 on Linux. For some
subjects, it looks that the pipeline stucked in the middle of mri_cc and
keeps running for days (without any error message). Last time when it
occurred I thought it may be caused by some hardware-r
