Re: [Freesurfer] tracula -path option 0 unknown

2013-07-15 Thread Gerit Pfuhl
Hi, It was set to 7500 in the original dmrirc file. Now I use a file from another subject and changed the dcmlist. Hope that works. Regards Gerit On 15 July 2013 20:33, Anastasia Yendiki wrote: > > Hi Gerit - It seems like the nsample variable is empty. Are you by any > chance setting that to

Re: [Freesurfer] tracula -path option 0 unknown

2013-07-15 Thread Anastasia Yendiki
Hi Gerit - Can you please send the entire trac-all.log for this subject? There could be some clues in the info that's printed out from the earlier steps, even if there's no outright error in those steps. Thanks, a.y On Fri, 5 Jul 2013, Gerit Pfuhl wrote: > > Dear Freesurfer experts, > > for

[Freesurfer] tracula -path option 0 unknown

2013-07-05 Thread Gerit Pfuhl
Dear Freesurfer experts, for one subject (out of over 80 already processed) I get i nthe last step an error I am unable to locate. The output from the tracula -path command says at the end: option 0 unknown. There are no reported problems in -prep, and -bedp. The script uses default values (I run