Re: [Freesurfer] tkmedit reconstruction to perpendicular axes of ROIs

2008-07-25 Thread Doug Greve
No, but you can apply a rotation in tkmedit (though it might not rotate the surfaces or the aseg). doug Aaron Shmookler wrote: Is it possible to reconstruct an MRI such that the images in tkmedit are perpendicular to the axis of a particular region such as in my ROI the temporal pole? As I

[Freesurfer] tkmedit reconstruction to perpendicular axes of ROIs

2008-07-25 Thread Aaron Shmookler
Is it possible to reconstruct an MRI such that the images in tkmedit are perpendicular to the axis of a particular region such as in my ROI the temporal pole? As I see them the tkmedit MRIs are oblique slices with the dorsal regions appearing caudally on the tksurfer (volumetric) images relative t