Hi Antonella
it's hard for us to know without seeing your data, but certainly setting
them both to 0 will show you everything
Bruce
On Wed, 21 Mar 2012, Antonella Kis
wrote:
Dear All,
I am trying to understand what should be my -fthresh and -fmax or -fmin and
-fmax values while visualizin
Dear All,
I am trying to understand what should be my -fthresh and -fmax or -fmin and
-fmax values while visualizing in tkmedit the significant map of uncorrected
results so I can see all the clusters in this map. Further,I want to see what
clusters from this map did not survived after correct
On Tue, 2007-04-17 at 12:36 +0200, Sebastian Moeller wrote:
> Aloha FreeSurfers,
>
> I have a small question regarding tkmedit and the line tool. Is it
> possible to specify start and end point for a line on the tcl prompt?
Sorry, no.
> My goal is to create a line in a volume that is not paral
Aloha FreeSurfers,
I have a small question regarding tkmedit and the line tool. Is it
possible to specify start and end point for a line on the tcl prompt?
My goal is to create a line in a volume that is not parallel to one of
the main axes. ATM I resort to turning the volume in question into
Hi Ray,
we do indeed have full subcortical labeling (see Neuron, 2002 paper), but
aren't able to distribute it yet. We will do so when able to, hopefully
sometime in the next year.
cheers,
Bruce
On Wed, 29 Sep 2004, Ray Fix wrote:
Hello Brian,
I found this email fascinating because I didn't know
Hello Brian,
I found this email fascinating because I didn't know FS had the ability
to measure hippocampal volumes.
Naively, I tried your suggestion, but found that the mri/aseg directory
doesn't exist. How is that normally created?
At this point I am using a somewhat archaic (year old ... bu
At this point I have a bfloat volume, that I loaded in tkmedit, and a
.label file that contains the resulting ROI. How do I obtain the volume
from that?
Thanks,
George P.
On Tue, 28 Sep 2004, Brian T. Quinn wrote:
mri_label_volume -s -l
will output to the logfile the volumes for each of the
mri_label_volume -s -l
will output to the logfile the volumes for each of the labelvalue(s) you
list.
example:
mri_label_volume -s s126 -l s126hipps.log $SUBJECTS_DIR/s126/mri/aseg 17 53
will output the hippocampal volumes for subject s126.
--
brian t. quinn
On Tue, 28 Sep 2004, George Pap
Hi all,
How can I compute the volume of a label created using tkmedit? Is there a
program to do this, or is it sufficient to count the number of points
listed in the label file and multiply by the volume per voxel? (And if so,
is the volume per voxel the voxel size for my original 40 slice axia
