Re: [Freesurfer] Temporal lobe segmentation

2009-06-08 Thread rahul
Hi Seyed, As Bruce mentions, currently the best way to get a complete temporal lobe segmentation might be to add each of the invidual temporal lobe labels (using either of the two parcellation systems). With regards to your specific questions, 1) both of the parcellation atlases do a fairly good j

Re: [Freesurfer] Temporal lobe segmentation

2009-06-08 Thread Bruce Fischl
Hi Seyed, I don't think there's any easy adding up of labels that gives you the temporal lobe, but Rahul and/or Christophe can correct me if I'm wrong. The easiest thing to do would be just draw the boundaries on fsaverage and map it to your subjects using mri_label2label. We should probably p

[Freesurfer] Temporal lobe segmentation

2009-06-08 Thread Seyed Shahab Sharifi
Subject: Temporal lobe segmentation Date: Tue, 2 Jun 2009 17:40:21 +0100 Hi all, I am interested in automated segmentation of temporal lobe using freesurfer. I understand that it is possible to add up the individual regions of a specific lobe, create one massive label for that lobe,

[Freesurfer] temporal lobe segmentation

2009-06-03 Thread Seyed Shahab Sharifi
Hi all, I am interested in automated segmentation of temporal lobe using freesurfer. I understand that it is possible to add up the individual regions of a specific lobe, create one massive label for that lobe, and get statistics on those. But I am not sure about the practicality of this appr