Re: [Freesurfer] talaraich transformation error

2018-02-03 Thread Douglas Greve
Check and, if necessary, edit the transform.  Then re-run recon-all including the -no-tal-check option On 2/2/18 9:14 AM, Dijkshoorn, A.B.C. (Aicha) wrote: Hello free surfer developers, I am attempting to compute cortical thickness for anatomical ROIs in neonates, but for some of my subject

[Freesurfer] talaraich transformation error

2018-02-02 Thread Dijkshoorn, A.B.C. (Aicha)
Hello free surfer developers, I am attempting to compute cortical thickness for anatomical ROIs in neonates, but for some of my subjects I get the following error when I run the auto-recon1 command: \n talairach_avi --i orig_nu.mgz --xfm transforms/talairach.auto.xfm \n ERROR: mpr2mni305 fai