I tried that and I got an error in the Mask function that excludes the
inter-hemispheric cut in matlab.
It doesn’t like the lh/rh.pial surfaces of the fsaverage.
This is the code:
0001 function mask = SurfStatMaskCut( surf );
0002
0003 %Mask that excludes the inter-hemisphere cut.
0004 %
You can map it onto fsaverage, which is made only from 40 subjects, so
there is a little more folding
On 01/09/2018 06:27 PM, Duran, Tugce wrote:
> Total N is 159. I have min # of 52 subjects for certain analyses. I used
> avgsubj. lh/rh.pial and lh/rh.thickness.10.mgh for reading surface and
Total N is 159. I have min # of 52 subjects for certain analyses. I used
avgsubj. lh/rh.pial and lh/rh.thickness.10.mgh for reading surface and
thickness data.
Can the visualization issue be fixed?
Thanks!
Tugce
dur...@iupui.edu
On 1/9/18, 6:19 PM, "freesurfer-boun...@nmr.mgh.harvard.edu on b
This is not entirely unexpected as the volume-based average of pial
surfaces will lose folds as you add subjects. How many subjects do you
have? Note that this is only a visualization issue if all your
underlying analysis is done on the surface.
On 01/08/2018 01:14 PM, Duran, Tugce wrote:
>
>
