users/mscat/users/valeria/2017_CME_MTR_PET/2017_MTR_PET/GLM0.7/surf2vol/M
>> S089_R01_29/lh.MS089_R01_29.subjspace.mgh as MGH
>> Done loading source values (nvtxs = 137036)
>> INFO: mapping vertices to closest voxel
>> INFO: resampling surface to volume
>> INFO: sampled 85686 voxels in the volume
>> INFO: writing output volume
>> to/
ischl
Sent: Sunday, February 17, 2019 2:05:58 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
you have a typo. It's not "-identify" it is "--identity"
On Sun, 17 Feb
2019, Barletta, Valeria wrote:
>
> Sure... There is also a screenshot
2:05:58 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
you have a typo. It's not "-identify" it is "--identity"
On Sun, 17 Feb
2019, Barletta, Valeria wrote:
>
> Sure... There is also a screenshot attached
>
>
> panarea:/autofs/sp
y 17, 2019 11:08:41 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
can you send us the full command line and screen output? You should not
need a registration
cheers
Bruce
On Sun, 17 Feb 2019, Barletta, Valeria wrote:
> I need to turn my lh and rh .mgh files (they are
arvard.edu
on behalf of Bruce
Fischl
Sent: Sunday, February 17, 2019 10:56:33 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
but do you need a registration? What space do you want the volume to be
in? If the standard FS "conformed" space you don't need
<https://aka.ms/ghei36>
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Bruce Fischl
Sent: Sunday, February 17, 2019 10:56:33 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
but do you need a registration? What space do y
Outlook for Android
__
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Bruce
Fischl
Sent: Saturday, February 16, 2019 6:58:46 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
Hi Vale
mri_surf2vol is to take take from the s
ruce Fischl
Sent: Saturday, February 16, 2019 6:58:46 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] surf2vol ERROR
Hi Vale
mri_surf2vol is to take take from the surface to the volume within one
subject. Why do you need a trgsubject? You can compute the registration
with e.g. bbregi
Hi Vale
mri_surf2vol is to take take from the surface to the volume within one
subject. Why do you need a trgsubject? You can compute the registration
with e.g. bbregister. Maybe I'm not understanding what you are trying to
do
cheers
Bruce
On Sat, 16 Feb 2019, Barletta, Valeria wrote:
Dear all,
I am trying to register surfaces to a volume by this command:
mri_surf2vol --subject MS089_R01_29 --hemi rh --rh.MS089_R01_29.subjspace.mgh
--hemi lh --surfval lh.MS089_R01_29.subjspace.mgh --o CME_MS089_R01_29.nii.gz
--merge combined-CL.nii.gz --trgsubj MS089_R01_29
And am obtainin
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