Re: [Freesurfer] subcortseg with files processed with older version

2005-10-07 Thread Nick Schmansky
Kristine, I think the subcortical labeling step requires the NU files, so these would have to be created for your old subjects. You can do this with: recon-all -nuintensitycor -subjid This will create the nu file (or files, if orig files are COR files). No other files are touched (no edits los

[Freesurfer] subcortseg with files processed with older version

2005-10-05 Thread walhovd
Hi We've some data processed with the FS version prior to the dev version. Now we want to subcortically label these, but when recon-all -subcortseg -segstats -subjid we get error:cannot find nu/COR-info understandably, since there is no nu for the old version. Is it possible to work around t