Re: [Freesurfer] Smooth overlay in command line {Disarmed}

2017-03-23 Thread Kevin Aquino
You can use mri_surf2surf with the -nsmooth flag but just remember to set the target and source subject as the same subject, [check out the info in --help :) ] Cheers, *Dr Kevin Aquino* Research fellow, Sir Peter Mansfield Magnetic Resonance Center, The University of Nottingham. Honorary Resea

[Freesurfer] Smooth overlay in command line

2017-03-23 Thread Dorian P.
Is it possible to set the smooth overlay option (i.e. no of iterations) from command line instead of freeview? I am taking some screenshots that would look nicer with a smoothed overlay. Dorian ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu h

Re: [Freesurfer] smooth overlay

2013-04-24 Thread Douglas N Greve
For each step each vertex is averaged with its nearest neighbor. If you use two steps, then this is done twice. doug On 04/24/2013 12:24 PM, Thomas Janssens wrote: > Dear Freesurfers, > > During the display of my data in tksurfer I smoothed my overlay with 1 > smoothing step (Tools > Surface >

[Freesurfer] smooth overlay

2013-04-24 Thread Thomas Janssens
Dear Freesurfers, During the display of my data in tksurfer I smoothed my overlay with 1 smoothing step (Tools > Surface > Smooth Overlay... ). All I could figure out was that this is done by sclv_smooth but what is exactly happening mathematically in this case? What does 1 smoothing step corres