a-ha! I forgot to add .gz
sorry for the silly error.
thanks.
michelle
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It really thinks that eccen/real.nii does not exist. What does
ls -l eccen/real.nii
return?
Michelle Umali wrote:
> Hi Doug,
> Here is the output
> Thanks. -Michelle
>
> BOTANICA:/usr/local/freesurfer/subjects/retinotopy/sj25/bold/rtopy.self.rh>
> rtview.sh --debug --s sj25 --lh --eccen --real ecc
Hi Doug,
Here is the output
Thanks. -Michelle
BOTANICA:/usr/local/freesurfer/subjects/retinotopy/sj25/bold/rtopy.self.rh>
rtview.sh --debug --s sj25 --lh --eccen --real eccen/real.nii --imag
eccen/imag.nii --fsig eccen/fsig.nii
set echo = 1 ;
breaksw
breaksw
end
end
while ( $#argv != 0 )
while (
Can you run it with --debug and send me the terminal output?
Michelle Umali wrote:
> Dear All,
> I am still having trouble generating polar and eccen maps with rtview.
>
> I did this:
> cd $SUBJECTS_DIR/retinotopy/sj07/bold/rtopy.self.lh
> rtview.sh --s sj07 --lh --eccen \
> --real eccen/real.n
Dear All,
I am still having trouble generating polar and eccen maps with rtview.
I did this:
cd $SUBJECTS_DIR/retinotopy/sj07/bold/rtopy.self.lh
rtview.sh --s sj07 --lh --eccen \
--real eccen/real.nii --imag eccen/imag.nii --fsig eccen/fsig.nii
The subjectname file is in $SUBJECTS_DIR/retinot
