Re: [Freesurfer] regarding slice timing

2006-05-27 Thread Sebastian Moeller
Hi Doug, thanks for the quick reply. On 26. May 2006, at 23:00 Uhr, Doug Greve wrote: Try using stc-sess (it is a front-end for fsl's slicetimer). If I read the documentation correctly slicetimer reinterpolates each slice to be at the timepoint half TR. My gut feeling tells me, that this re

Re: [Freesurfer] regarding slice timing

2006-05-26 Thread Doug Greve
Try using stc-sess (it is a front-end for fsl's slicetimer). doug Sebastian Moeller wrote: Dear fellow FreeSurfers, does anybody know how to account for interleaved slice acquisition of functionals in fs-fast? Basically all my scans were taken interleaved instead of linear ordered, so I thi

[Freesurfer] regarding slice timing

2006-05-26 Thread Sebastian Moeller
Dear fellow FreeSurfers, does anybody know how to account for interleaved slice acquisition of functionals in fs-fast? Basically all my scans were taken interleaved instead of linear ordered, so I think it might be a good idea to tell the system (even though the block design used should not be