Hi Falk,
Thanks for this valuable information. For sure, I will try it out, and let you
know how it goes.
Xiaomin
From: falk.lu...@gmx.net
To: freesurfer@nmr.mgh.harvard.edu
Date: Thu, 3 Apr 2014 00:32:23 +
Subject: Re: [Freesurfer] recon all with 7T data
Hi Xiaomin,
you could also
Subject: Re: [Freesurfer] recon all with 7T data
>
>
> hi Xiaomin,
>
> 7T data can sometimes cause Talairach failures with the standard
> registration tools due to the strong bias fields. the Talairach
> transformation is used for identifying seed points, and the -use-mritotal
&g
. It needs
to be rerun after correcting that error(s).
Xiaomin
> Date: Tue, 1 Apr 2014 19:52:53 -0400
> From: j...@nmr.mgh.harvard.edu
> To: freesurfer@nmr.mgh.harvard.edu
> Subject: Re: [Freesurfer] recon all with 7T data
>
>
> hi Xiaomin,
>
> 7T data can sometimes ca
hi Xiaomin,
7T data can sometimes cause Talairach failures with the standard
registration tools due to the strong bias fields. the Talairach
transformation is used for identifying seed points, and the -use-mritotal
flag just specifies that the MINC software will be used for the
Talairach'ing.
se
I tried to do surfer reconstruction (version 5.3) collected in SIEMENS 7T, with
error: imgreg_4dfp /opt/freesurfer-530/average/711-2C_as_mni_average_305
/opt/freesurfer-530/average/711-2B_as_mni_average_305_mask talsrcimg_g11 none
talsrcimg_to_711-2C_as_mni_average_305_t4 1283' failed! status=
