Re: [Freesurfer] recon-all and local Gyrification Index

2016-03-05 Thread Bruce Fischl
Hi Ankita have you tried contacting mathworks? cheers Bruce On Sat, 5 Mar 2016, Ankita Chatterjee wrote: Hello Freesurfer experts - raising this question once more. Also if I downloaded a trial version of Matlab to see how it integrates, but am unable to activate it. Anyone with similar issu

Re: [Freesurfer] recon-all and local Gyrification Index

2016-03-05 Thread Ankita Chatterjee
Hello Freesurfer experts - raising this question once more. Also if I downloaded a trial version of Matlab to see how it integrates, but am unable to activate it. Anyone with similar issues? When I run my recon-all - lgi command, it starts up and fails with an error that MATLAB has a licensing erro

[Freesurfer] recon-all and local Gyrification Index

2016-03-03 Thread Ankita Chatterjee
Hello, I ran several recon-all processes on raw T1 MRI data. I was trying to run recon-all -lgi as per the instructions from this paper - http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3369773/ but it fails with an error that Matlab is required. So, my question is if local GI is already computed by ru