Re: [Freesurfer] recon-all -aseg.stats doubt

2013-09-04 Thread Bruce Fischl
Hi Anupa 5.2 is a deprecated version and you should definitely upgrade to 5.3. What was your recon-all command line? You probably did generate the cortical stats,and they are in a different file (e.g. aparc.stats). cheers Bruce On Tue, 3 Sep 2013, Anupa AV wrote: Dear FS experts, I'm us

[Freesurfer] recon-all -aseg.stats doubt

2013-09-03 Thread Anupa AV
Dear FS experts, I'm using freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 for my analysis. After recon-allĀ  with hippo-subfield, only 45 brain volumes were genreated in aseg.stats file. Freesurfer v.5.1 analysis were able to generate cortical structure's volumes also. Where v.5.2 mainly gen

Re: [Freesurfer] recon-all -aseg.stats doubt

2013-09-03 Thread Douglas N Greve
look inthe ?h.aparc.stats files doug On 08/31/2013 06:33 AM, Anupa AV wrote: > Dear FS experts, > > I'm using freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 for my > analysis. > After recon-all with hippo-subfield, only 45 brain volumes were > genreated in aseg.stats file. > Freesurfer v.5.

[Freesurfer] recon-all -aseg.stats doubt

2013-08-31 Thread Anupa AV
Dear FS experts, I'm using freesurfer-Linux-centos6_x86_64-stable-pub-v5.2.0 for my analysis. After recon-allĀ  with hippo-subfield, only 45 brain volumes were genreated in aseg.stats file. Freesurfer v.5.1 analysis were able to generate cortical structure's volumes also. Where v.5.2 mainly gener