updated stats files aseg.stats and ?h.aparc.stats incorporate any changes
made.
Best,
Yujing
From: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Alexopoulos, Dimitrios
Sent: Monday, July 10, 2023 11:44 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] re-running recon-all after as
Subject: Re: [Freesurfer] re-running recon-all after aseg.presurf.mgz edits
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With '-autorecon2-noaseg -autorecon3', I believe aseg.mgz is re-created. So,
aseg.stats should reflect the changes.
I'm not sure cor
rom: freesurfer-boun...@nmr.mgh.harvard.edu
On Behalf Of Alexopoulos, Dimitrios
Sent: Thursday, June 29, 2023 4:57 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] re-running recon-all after aseg.presurf.mgz edits
External Email - Use Caution
A few quick questions FS experts.
External Email - Use Caution
A few quick questions FS experts.
I made manual edits on subcortical structures in outputs from FS6.0.
Specifically, I made the edits on the aseg.presurf.mgz file. I then reran using:
recon-all -s neo267e_nil -autorecon2-noaseg -autorecon3
Do the upd
