well, we don't run only those steps to generate any volume. Probably your
best bet would be the norm.mgz, although as Doug says it will have a
cerebellum in it, which you can strip with the aseg.mgz
cheers
Bruce
On Sun, 23 Jun 2019, ping cao wrote:
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Thank you for your reply.
I also want to know which file has just finished with 1-3 steps?
Is it nu.mgz? Or nu.mgz?
*T1.mgz* aseg.presurf.mgz
> aparc+aseg.mgz brain.finalsurfs.mgz
It does 1-3. It also labels cerebellum which you could then use to perform #4
On 6/23/2019 7:03 AM, ping cao wrote:
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Dear expert，
Thank you for reading!
I want to do these four pre-processing steps:
1. Re-sampling each MR image to 256*256*256;
2. Using the N
External Email - Use Caution
Dear expert，
Thank you for reading!
I want to do these four pre-processing steps:
1. Re-sampling each MR image to 256*256*256;
2. Using the N3 algorithm for intensity inhomogeneity correction;
3. Skull stripping;
4. Removing the cerebellum.
Does "
