Re: [Freesurfer] question for files recon-all generated

2019-07-16 Thread Bruce Fischl
Hi Ping first, all files in the mri dir are in native coordinates (or "conformed" versions of them), not transformed to any other coordinate system. The norm has been linearly registered to our internal atlas and is subsequently nonlinearly registered to it, but remains in its original coordin

[Freesurfer] question for files recon-all generated

2019-07-16 Thread ping cao
External Email - Use Caution Dear expert, I want to know if the *norm.mgz* is already linearly registered? And is the *T1.mgz *not linearly registered? They are all generated from *recon-all. * Is there any file non-linearly registered? Best wishes, ping ___