Re: [Freesurfer] problems with tksurfer

2010-05-13 Thread Krish Subramaniam
Hi Maria The SUBJECTS_DIR is one directory above the my_subj_name. Sorry if this is a trivial point, but worth a check. can you give me the output of following commands echo $SUBJECTS_DIR ls $SUBJECTS_DIR On May 12, 2010, at 7:03 PM, iac...@nmr.mgh.harvard.edu wrote: > Hi all! > I have some

Re: [Freesurfer] problems with tksurfer

2010-05-12 Thread Bruce Fischl
Hi Maria, what version are you using? If the data is local to MGH and you point me at it I'll take a look Bruce On Wed, 12 May 2010 iac...@nmr.mgh.harvard.edu wrote: > Hi all! > I have some problems to visualize surfaces by tksurfer. When I try to load > a surface with the command tksurfer my_su

[Freesurfer] problems with tksurfer

2010-05-12 Thread iacono
Hi all! I have some problems to visualize surfaces by tksurfer. When I try to load a surface with the command tksurfer my_subj_name lh inflated I receive the following error: ERROR: could not read header info from T1 or orig in homes//my_subj_name/mri The SUBJECTS_DIR is the correct one and in

Re: [Freesurfer] Problems with tksurfer display on laptop

2010-02-12 Thread jentis
I tried all the solutions listed on the help page but they don't work. My graphics card is an Intel Mobile 4 Series Chipset Integrated Graphics Controller. How do I update the drivers? Jon > have you tried updating your video drivers? Freeview doesn't currently > have any tools for tracing on

Re: [Freesurfer] Problems with tksurfer display on laptop

2010-02-11 Thread Bruce Fischl
have you tried updating your video drivers? Freeview doesn't currently have any tools for tracing on the surface, I don't think. Bruce On Thu, 11 Feb 2010 jen...@nmr.mgh.harvard.edu wrote: > Hi, > > I have a laptop equipped with Centos and Freesurfer but I can't get > tksurfer to properly dis

Re: [Freesurfer] Problems with tksurfer display on laptop

2010-02-11 Thread Nick Schmansky
try the suggestions detailed here: http://surfer.nmr.mgh.harvard.edu/fswiki/TksurferDisplayProblems On Thu, 2010-02-11 at 07:34 -0500, jen...@nmr.mgh.harvard.edu wrote: > Hi, > >I have a laptop equipped with Centos and Freesurfer but I can't get > tksurfer to properly display the surface fil