Re: [Freesurfer] problem on recon-all

2010-03-12 Thread Xiaoying Tang
Hi Allison, You are so helpful. Thanks a lot. Best, Xiaoying - Original Message - From: Allison Stevens Date: Friday, March 12, 2010 7:43 am Subject: Re: [Freesurfer] problem on recon-all To: Xiaoying Tang Cc: freesurfer@nmr.mgh.harvard.edu > Xiaoying, > There are directions f

Re: [Freesurfer] problem on recon-all

2010-03-12 Thread Allison Stevens
Xiaoying, There are directions for how to do this located here: https://surfer.nmr.mgh.harvard.edu/fswiki/UserContributions/FAQ?highlight=%28FAQ%29#SkullStrippingOptions Allison -- On Fri, 12 Mar 2010, Xiaoying Tang wrote: > Hi all, > > When we do recon-all, we usually do autorecon1, autorecon2

[Freesurfer] problem on recon-all

2010-03-11 Thread Xiaoying Tang
Hi all, When we do recon-all, we usually do autorecon1, autorecon2, and autorecon3 in sequence. But now suppose I have already have a very good skull-stripped subject. I mean I don't need to do skull-stripping with freesurfer. But I want to get greymatter and white matter, which are generated i