try this https://surfer.nmr.mgh.harvard.edu/fswiki/FsAnat-to-NativeAnat
On 5/16/17 12:34 PM, Cong wrote:
> Dear Doug
> I think my problem may caused by that extracted ROI have different
> coordination to original
> T1 image, although they match well in freeview. For example, one voxel is
>
Dear Doug
I think my problem may caused by that extracted ROI have different
coordination to original
T1 image, although they match well in freeview. For example, one voxel is
[148,144,131] in
extracted left thalamus but [71,130,89] in original T1.nii and T1.mgz. So how
to extract a ROI havi
no idea. you'll proably have to contact the MRIcro group
On 5/16/17 8:28 AM, Cong wrote:
Dear FSers
I extracted left thalamus as ROI volume from aseg.mgz by this command:
/ mri_binarize --i control001/mri/aseg.mgz --match 10 --o
control001/roi/l_thal.nii/
I overlaid l_thal.nii to contro
Dear FSers
I extracted left thalamus as ROI volume from aseg.mgz by this command:
mri_binarize --i control001/mri/aseg.mgz --match 10 --o
control001/roi/l_thal.nii
I overlaid l_thal.nii to control001.nii in MRIcro software in a Macbook and
it looks well.
However, when I overlai
