Re: [Freesurfer] problem about 'mri_glmfit-sim

2014-03-30 Thread Douglas Greve
How did you create the glmdir? mri_glmfit should set things up so that all of those files are there On 3/30/14 11:09 AM, yd li wrote: Hello experts, I'm working with FS 5.3.0. When I used 'mri_glmfit-sim --glmdir /home/a/freesurfer/g2.lh/C1 --sim mc-z 5000 4 mc-z.abs --sim-sign abs --cwp

[Freesurfer] problem about 'mri_glmfit-sim

2014-03-30 Thread yd li
Hello experts, I'm working with FS 5.3.0. When I used 'mri_glmfit-sim --glmdir /home/a/freesurfer/g2.lh/C1 --sim mc-z 5000 4 mc-z.abs --sim-sign abs --cwpvalthresh 0.05 --overwrite' for multiple comparison correction, i got an error message 'cannot find /.../g2.lh/C1/mri_glmfit.log'. I found a mr