wishes,
> Kevin
> Date: Tue, 15 Jan 2019 21:47:37 + From: "Greve, Douglas N.,Ph.D."
> Subject: Re: [Freesurfer] preproc-sess mask
> issue To: "freesurfer@nmr.mgh.harvard.edu"
> Message-ID:
> <5b4ea669-5ade-6be4-2435-aed05faf1...@mgh.harvard.edu> C
?
Thank you again for your help!
Best wishes,
Kevin
Date: Tue, 15 Jan 2019 21:47:37 +
From: "Greve, Douglas N.,Ph.D."
Subject: Re: [Freesurfer] preproc-sess mask issue
To: "freesurfer@nmr.mgh.harvard.edu"
Message-ID: <5b4ea669-5ade-6be4-2435-aed05faf1...@mgh.harvard.
Yea, the 5.3 stream used FSL brain masking to make the masks for the
fmri. Version 6 uses the FS brain mask transferred into fmri space.
Inevitably, you will have to do a lot of reprocessing. The simplest
thing to do is to delete the mask files in session/bold/masks and
sessoin/bold/RRR/masks (
