fsfast does not work with topup in this way. You can do a couple of
things (1) do the preprocessing yourself and then turn it off for fsfast
(2) create your own B0 map and put it in to sessid/fsd/b0dcmap.nii.gz
and specify -b0dc in mkanalysis-sess
On 12/8/2022 9:50 AM, Asa Borzabadi Farahan
External Email - Use Caution
Hi,
I have two basic questions.
1- I am currently having some AP fMRI runs and I have also acquired a single PA
run to be able to do distortion correction, my original plan was to use FSL and
apply topup to get the undistorted fMRI data. How can I f
