Re: [Freesurfer] pial surface crossing white

2014-09-30 Thread Harms, Michael
Yeah, the time stamps look fine, and the euler numbers are correct. I've uploaded the pre-edited (L408_base_orig.tgz) and edited (L408_base.tgz) directories. This was related to the creation of a 'base' template, so the commands are a little bit involved.  For the "L408_base_orig" set of

Re: [Freesurfer] pial surface crossing white

2014-09-29 Thread Bruce Fischl
Hi Mike that's really strange. Are you sure you recreated the pial??? Can you double check time-stamps and such? And Euler number to make sure that it is the same for white and pial? If that all looks right, upload the subject and send me the command line you used for the rerunning and I'll i