Re: [Freesurfer] overlap individual thickness map on average surface

2011-01-14 Thread Bruce Fischl
you can either use --tfmt to specify the format, or just add .mgh to the end of the output file so it knows what format to save it in. On Fri, 14 Jan 2011 t...@ms36.hinet.net wrote: [NON-Text Body part not included] ___ Freesurfer mailing list

Re: [Freesurfer] overlap individual thickness map on average surface

2011-01-14 Thread tulu
Thank Bruce, sorry for my simple question. I try to display one subject's thickness map on average surface. so I try mri_surf2surf --srcsubject /root/freesurfer/subjects/r00275571 --srcsurfval /root/freesurfer/subjects/r00275571/surf/lh.thickness --trgsubject /root/freesurfer/subjects/fsaverage --t

Re: [Freesurfer] overlap individual thickness map on average surface

2011-01-13 Thread Bruce Fischl
Hi JLH you can use mri_surf2surf on the ?h.thickness file with fsaverage as the target subject. cheers Bruce On Fri, 14 Jan 2011 t...@ms36.hinet.net wrote: [NON-Text Body part not included] ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.ed

[Freesurfer] overlap individual thickness map on average surface

2011-01-13 Thread tulu
Dear FS expertsI hope to display individual's thickness map on average subjects' surface after I finish all subjects' recon-all step and make_average_subject step. Is anyone can guide me how to do that ? thanks in advancebestJLH--- 本郵件來自HiNet WebMail ---_