Sorry for incremental updates:
c) you can pass the -flirt-motioncor flag to recon all to revert to the
old way (using flirt)
If your scans are decent quality I would recommend b) as it is unclear
if averaging actually helps.
-Martin
On Tue, 2011-11-08 at 13:45 -0500, Martin Reuter wrote:
> Hi J
I see you have only two inputs. 4GB should be enough. Are you running a
lot of other stuff that takes up memory?
-Martin
On Tue, 2011-11-08 at 13:35 -0500, Jennifer Addicks wrote:
> Hello,
>
>
> I have been successfully running FreeSurfer 4.5 on my MacOSX 10.5.8
> with no issues. I recently in
Hi Jennifer
for question 2. You run out of memory. How many within session inputs
are you trying to motion correct?
You can
a) try downsample your hi-res images before processing
b) try to only select a single input to recon-all instead of averaging
inputs.
Best, Martin
On Tue, 2011-11-08 at
Hello,
I have been successfully running FreeSurfer 4.5 on my MacOSX 10.5.8 with no
issues. I recently installed FreeSurfer 5.1 to a separate directory on the
same laptop to analyze a new dataset and I am now having various issues
with both FreeSurfer versions.
1. For Version 4.5, I path the free
Alex,
The 2004-02-18 version of freesurfer is now posted here:
https://surfer.nmr.mgh.harvard.edu/pub/dist/
called this:
freesurfer-20040218-Linux.tar.gz
un-gzipped by:
tar zxvf freesurfer-20040218-Linux.tar.gz
which uncompresses a number of files, including an INSTALL file to
HI,
I need to re-install an older version of freesurfer in order to finish a study
I have been working on, but it seems that particular distribution is no longer
on the website. I think it was the 20040218 distribution (or maybe that was
that update for it, I'm not sure). The recon-all -version
