Re: [Freesurfer] obtaining residuals after regressing out nuisance parameters

2013-02-25 Thread Douglas N Greve
Hi Caspar, youcan do it that way and then extract the average time course from the residuals. Otherwise, you'd have to do the regression yourself in matlab. doug On 02/22/2013 11:01 AM, Caspar M. Schwiedrzik wrote: > hm, I just realized that I should probably run selxavg3-sess with > -svres and

Re: [Freesurfer] obtaining residuals after regressing out nuisance parameters

2013-02-22 Thread Caspar M. Schwiedrzik
hm, I just realized that I should probably run selxavg3-sess with -svres and then take the residuals from the res folder, right? caspar 2013/2/22 Caspar M. Schwiedrzik : > Dear Freesurfer experts, > I am running some functional connectivity analyses using FSFAST in > Freesurfer 5.1. > I would like

[Freesurfer] obtaining residuals after regressing out nuisance parameters

2013-02-22 Thread Caspar M. Schwiedrzik
Dear Freesurfer experts, I am running some functional connectivity analyses using FSFAST in Freesurfer 5.1. I would like to compare seed time courses (which I later use as predictors) obtained after regular pre-processing with seed time courses obtained after regressing out several nuisance paramet