Re: [Freesurfer] mri_surfcluster questions

2015-03-02 Thread Douglas N Greve
On 02/26/2015 01:46 PM, Janosch Linkersdörfer wrote: > Hi all, > > I experimented with the different flags for mri_surfcluster and have 2 issues > that I don't understand, it would be great if somebody could enlighten me: > > 1) When I set --thmin (or --fdr) with --thsign abs, I get what I would

[Freesurfer] mri_surfcluster questions

2015-02-26 Thread Janosch Linkersdörfer
Hi all, I experimented with the different flags for mri_surfcluster and have 2 issues that I don't understand, it would be great if somebody could enlighten me: 1) When I set --thmin (or --fdr) with --thsign abs, I get what I would expect, i.e., only clusters with a minimum vertex-wise p-value