Did you download the patch? See the "
If You're Not at an Organized Course" part of this page
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/MultipleComparisonsV6.0Perm
On 3/17/2020 11:31 AM, Varun Chandran wrote:
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Dear FS experts,
I am trying t
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Dear FS experts,
I am trying to run the cluster-wise correction by using permutation based
multiple comparison. For this, as you would know, we use: mri_glmfit-sim
In attempt to this, I tried running different options
mri_glmfit --y lh.thickness.AT.1
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Dear Doug,
Thank you very much for clarifying my doubt :)
kind regards,
Varun
On Fri, Mar 13, 2020 at 10:40 PM Douglas N. Greve
wrote:
> It looks like you are using gender as a continuous variable. You should
> set up two classes, one for male one
It looks like you are using gender as a continuous variable. You should
set up two classes, one for male one for female. You can then test for
the AT slope with a contrast of
0 0 0 0 0.5 0.5
you don't need separate pos and neg contrasts
For mri_glmfit-sim, a threshold of 1.3 (p<.05) is way too
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Dear FS experts,
I am looking at the relationship between the cortical thickness and a
behaviour measure, while controlling for the effects of age and gender. In
this analysis, I am using CT_AT.fsgd, contrast_pos.txt and a
contrast_neg.txt.
GroupDescr
