of Lilla Zollei
Sent: Sunday, August 19, 2018 3:16:31 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
Hi Noam,
What version of FS are you using? I have incorporated a change into dev in
January. Have you seen this note?
https://mail.nmr.mgh.harvar
aturday, August 18, 2018 3:08:22 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
Thanks Lilla!
A follow-up question: How can I use the applyMorph function to morph the points
to the MNI152 space?
I'm trying to use the combined_tocvs_avg35_inMN
52.txt
against cvs_avg35_inMNI152/mri/brainmask.mgz, at least half of them were
outside the brain.
Any ideas?
Thanks,
Noam
From: Peled, Noam
Sent: Saturday, August 18, 2018 3:08:22 PM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_cvs_register using fsa
om: freesurfer-boun...@nmr.mgh.harvard.edu
> on behalf of Lilla Zollei
>
> Sent: Wednesday, August 1, 2018 8:35:49 AM
> To: Freesurfer support list
> Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
>
> Hi Noam,
>
> Can you can use the --mni flag?
>
>
AM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
Hi Noam,
Can you can use the --mni flag?
"Use the CVS atlas in MNI152 space as a target for registration (as
opposed to the default CVS template)"
Lilla
On Wed, 1 Aug 2018, Peled, Noam wrote:
mgh.harvard.edu
on behalf of Douglas N. Greve
Sent: Wednesday, August 1, 2018 11:19:16 AM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
FYI, fsaverage is already in MNI305 space
On 08/01/2018 11:14 AM, Peled, Noam wrote:
>
> Thanks Lilla!
>
; *To:* Freesurfer support list
> *Subject:* Re: [Freesurfer] mri_cvs_register using fsaverage
>
> Hi Noam,
>
> Can you can use the --mni flag?
>
> "Use the CVS atlas in MNI152 space as a target for registration (as
> opposed to the default CVS template)"
>
> Lilla
>
behalf of Lilla Zollei
Sent: Wednesday, August 1, 2018 8:35:49 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] mri_cvs_register using fsaverage
Hi Noam,
Can you can use the --mni flag?
"Use the CVS atlas in MNI152 space as a target for registration (as
opposed to the defaul
Hi Noam,
Can you can use the --mni flag?
"Use the CVS atlas in MNI152 space as a target for registration (as
opposed to the default CVS template)"
Lilla
On Wed, 1 Aug 2018, Peled, Noam wrote:
I need to transfer one of our patient's electrodes locations (depth electrodes,
they aren't loc
I need to transfer one of our patient's electrodes locations (depth electrodes,
they aren't located on the cortical surface) to MNI305 space.
For that, I'm trying to use mri_cvs_register to register the patient to
fsaverage. I'm using to the following command:
mri_cvs_register --mov subjid --te
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