Re: [Freesurfer] mri_convert resample

2009-10-02 Thread Douglas N Greve
You can use --frame to extract a certain frame. Other frame ops are --ndrop, --nskip, and --fsubample doug Satrajit Ghosh wrote: > can i use mri_convert to resample a 4-d nifti volume? currently it > appears to write out just one frame. > > cmdline used: > > mri_convert -vs 2 2 2 r234000-20-1_w

Re: [Freesurfer] mri_convert resample

2009-10-02 Thread Nick Schmansky
Satra, This is an oversite in the mri_convert code. For the -vs portion, its not looping on the frames. I've fixed this. Can you tell me your platform? I can post a new mri_convert on the site. Nick On Fri, 2009-10-02 at 13:48 -0400, Satrajit Ghosh wrote: > can i use mri_convert to resample a

[Freesurfer] mri_convert resample

2009-10-02 Thread Satrajit Ghosh
can i use mri_convert to resample a 4-d nifti volume? currently it appears to write out just one frame. cmdline used: mri_convert -vs 2 2 2 r234000-20-1_warped.nii r234000-20-1_warped_fsresample.nii the input volume has 51 timepoints the output vol has 1. would you recommend another, more appro