When you add --wm, you are telling mri_binarize is give you all of white
matter (this include CC and cerebellar WM and hypointensities). When you
pass just 2 and 41, you get only cerebral WM.
doug
Palzes, Vanessa wrote:
> Could someone please explain to me the difference between mri_binarize
> a
Could someone please explain to me the difference between mri_binarize
and mri_extract_label?
I had been using mri_extract_label to create ROI masks of cerebral white
matter (2 and 41). I recently became aware that this would give me a
label with 0 and 128. I tried mri_binarize (with the same matc
