Re: [Freesurfer] mpr2mni305 talaraich transformation error

2018-02-05 Thread Dijkshoorn, A.B.C. (Aicha)
orn From: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] on behalf of Boyd, Emma [ebo...@mgh.harvard.edu] Sent: Friday, February 02, 2018 5:21 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] mpr2mni305 talaraich transformation error

Re: [Freesurfer] mpr2mni305 talaraich transformation error

2018-02-02 Thread Boyd, Emma
@nmr.mgh.harvard.edu Subject: [Freesurfer] mpr2mni305 talaraich transformation error Hello free surfer developers, I am attempting to compute cortical thickness for anatomical ROIs in neonates, but for some of my subjects I get the following error when I run the auto-recon1 command: \n

[Freesurfer] mpr2mni305 talaraich transformation error

2018-02-02 Thread Dijkshoorn, A.B.C. (Aicha)
Hello free surfer developers, I am attempting to compute cortical thickness for anatomical ROIs in neonates, but for some of my subjects I get the following error when I run the auto-recon1 command: \n talairach_avi --i orig_nu.mgz --xfm transforms/talairach.auto.xfm \n ERROR: mpr2mni305 fai