Re: [Freesurfer] motion estimates

2017-08-31 Thread James Welsh
Perfect! Thank you a bunch! From: freesurfer-boun...@nmr.mgh.harvard.edu on behalf of Bruce Fischl Sent: Thursday, August 31, 2017 10:19:36 AM To: Freesurfer support list Subject: Re: [Freesurfer] motion estimates just the brain. For the spine you probably

Re: [Freesurfer] motion estimates

2017-08-31 Thread Bruce Fischl
10:08:17 AM To: Freesurfer support list Subject: Re: [Freesurfer] motion estimates   Hi James after running recon-all you can use mri_cnr to measure CNR (which is usually more interesting than SNR). Motion is harder. Martin investigated this at some point, but I'm not sure where he left it c

Re: [Freesurfer] motion estimates

2017-08-31 Thread James Welsh
Subject: Re: [Freesurfer] motion estimates Hi James after running recon-all you can use mri_cnr to measure CNR (which is usually more interesting than SNR). Motion is harder. Martin investigated this at some point, but I'm not sure where he left it cheers Bruce On Thu, 31 Aug 2017, James Welsh

Re: [Freesurfer] motion estimates

2017-08-31 Thread Bruce Fischl
Hi James after running recon-all you can use mri_cnr to measure CNR (which is usually more interesting than SNR). Motion is harder. Martin investigated this at some point, but I'm not sure where he left it cheers Bruce On Thu, 31 Aug 2017, James Welsh wrote: Dear Freesurfer experts, I wan

[Freesurfer] motion estimates

2017-08-31 Thread James Welsh
Dear Freesurfer experts, I want to inquire if there are any tools in freesurfer that can help to evaluate T1 quality regarding motion and SNR. Thanks! James ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mai