Re: [Freesurfer] localgi make_outer_circle

2014-04-02 Thread Marie Schaer
cess into a further script? > > I have attached the relevant scripts and output. > > Can you help me. > > Thanks > > Charnjit > > > > > > ____________ > From: Marie Schaer [marie.sch...@unige.ch] > Sent: 02 April 2014 12:45 > To: Freesurfer support

[Freesurfer] localgi make_outer_circle

2014-04-02 Thread Charnjit Sidhu
ed the relevant scripts and output. Can you help me. Thanks Charnjit From: Marie Schaer [marie.sch...@unige.ch] Sent: 02 April 2014 12:45 To: Freesurfer support list Cc: Charnjit Sidhu Subject: Re: [Freesurfer] localgi make_outer_circle Hi Charnjit

Re: [Freesurfer] localgi make_outer_circle

2014-04-02 Thread Marie Schaer
Hi Charnjit, Can you copy / paste the error message? Otherwise I can't help you. Best, Marie On Apr 2, 2014, at 12:54 PM, Charnjit Sidhu wrote: > Hi, > > Does anyone know how matlab is called in the localgi process. > > My script fails during the make_outer_circle process, I need to expor

[Freesurfer] localgi make_outer_circle

2014-04-02 Thread Charnjit Sidhu
Hi, Does anyone know how matlab is called in the localgi process. My script fails during the make_outer_circle process, I need to export some variables before Matlab is called to enable it to work on our cluster (i.e different matlab path, userid) . How can I change the way matlab is called? T