Re: [Freesurfer] lgi mris_preproc

2014-10-09 Thread Douglas Greve
you should be able to use mris_preproc On 10/9/14 1:08 PM, Lars M. Rimol wrote: Hi, In the wiki page on the gyrification index it says that to sample the results to ico, use recon-all -s my_subject_id -qcache -measure pial_lgi If I prefer not to use qudec, can I instead use mris_preproc to d

[Freesurfer] lgi mris_preproc

2014-10-09 Thread Lars M. Rimol
Hi, In the wiki page on the gyrification index it says that to sample the results to ico, use recon-all -s my_subject_id -qcache -measure pial_lgi If I prefer not to use qudec, can I instead use mris_preproc to do the registration to atlas and concatenate the files and then use mri_surf2sruf to