Just wanted to keep as much of the older analysis as possible to save time,
because there are many subjects. Where can I start to save some time?
On Wed, Oct 8, 2008 at 10:04 AM, Bruce Fischl <[EMAIL PROTECTED]>wrote:
> you need to run it from earlier in the analysis. Is there any reason you
> do
you need to run it from earlier in the analysis. Is there any reason you
don't want to just rerun them from the start? I guess you could just run
the aseg stages individually
On Wed, 8 Oct 2008, R D wrote:
Thanks, this works and it recognizes it as a legacy analysis. Some subjects
work
fine th
Thanks, this works and it recognizes it as a legacy analysis. Some subjects
work
fine this way. But for some other subjects, it exits with
an error saying aseg.mgz not found.
mris_make_surfaces: could not read segmentation volume
/usr/home/rhdesai/From_old_apu_home3/freesurfer.subjects/335/mri/ase
hmm, Doug or Nick would be better at this, but try:
touch $SUBJECTS_DIR/$subjects/scripts/recon-all.status
then rerun the subject. Hopefully it will then recognize that it is a
legacy analysis.
cheers,
Bruce
On Mon, 6 Oct 2008, R D
wrote:
Hello,
I have some surfaces created by freesuf
Hello,
I have some surfaces created by freesufer in 2006. Spherical registration
was not done at that time, which needs to be done. I ran recon-all with
-legacy, but it crashed due to disk space problems. Now it doesn't run
either with or without -legacy option. When -legacy is specified, it says
