Re: [Freesurfer] labels in the surface {Disarmed}

2020-12-14 Thread Alberto Del Cerro Leon
External Email - Use Caution Hello, i used this code: mri_vol2surf --src /home/neuroimage/fsl/FreeSurfer/AAL.nii --regheader MNI --projfrac 0.5 --hemi lh --out /home/neuroimage/fsl/FreeSurfer/AAL-lh.mgh Also i tried to map the AAL into the surface of fsaverage with: mri_vol2surf -

Re: [Freesurfer] labels in the surface

2020-12-13 Thread Greve, Douglas N.,Ph.D.
This might be the way it is given that the AAL is volume-based and you are trying to put it on the surface. What is your vol2surf command? On 12/10/2020 6:59 AM, Alberto Del Cerro Leon wrote: External Email - Use Caution Hello Freesurfer team With your help i obtained a AAL atlas on the