Re: [Freesurfer] incorrect pial surfaces after watershed adjustment

2016-12-15 Thread Bruce Fischl
vard.edu] on behalf of Rizvi, Batool > [br2...@cumc.columbia.edu] > Sent: Wednesday, December 14, 2016 1:49 PM > To: Freesurfer support list > Subject: Re: [Freesurfer] incorrect pial surfaces after watershed adjustment > > Ohkay thanks, we'll go ahead and run autorecon2 an

Re: [Freesurfer] incorrect pial surfaces after watershed adjustment

2016-12-14 Thread Rizvi, Batool
-boun...@nmr.mgh.harvard.edu] on behalf of Rizvi, Batool [br2...@cumc.columbia.edu] Sent: Wednesday, December 14, 2016 1:49 PM To: Freesurfer support list Subject: Re: [Freesurfer] incorrect pial surfaces after watershed adjustment Ohkay thanks, we'll go ahead and run autorecon2 and autorecon

Re: [Freesurfer] incorrect pial surfaces after watershed adjustment

2016-12-14 Thread Rizvi, Batool
Sent: Wednesday, December 14, 2016 1:45 PM To: Freesurfer support list Subject: Re: [Freesurfer] incorrect pial surfaces after watershed adjustment Hi Batool if you need to change the watershed you will need to rerun everything from there forward. All of autorecon2 and autorecon3 I think at least c

Re: [Freesurfer] incorrect pial surfaces after watershed adjustment

2016-12-14 Thread Bruce Fischl
Hi Batool if you need to change the watershed you will need to rerun everything from there forward. All of autorecon2 and autorecon3 I think at least cheers Bruce On Wed, 14 Dec 2016, Rizvi, Batool wrote: Hi FreeSurfer experts,   We have a subject on which we had to do adjust the water