Re: [Freesurfer] how to threshold mgh surface and save the file

Hi Robert it would be pretty easy in matlab, or you can use mri_threshold. cheers Bruce On Wed, 24 Jul 2013, Robert Schulz wrote: Hi,   I'd like to theshold a surface mgh file at a certain value, set all values below the threshold 0 and save the file for further statistical analysis. mri_b

[Freesurfer] how to threshold mgh surface and save the file

Hi, I'd like to theshold a surface mgh file at a certain value, set all values below the threshold 0 and save the file for further statistical analysis. mri_binarize creates a binary mask which does not help in my case. Could anybody help me with the apprpriate command? Thank you very much