Re: [Freesurfer] hippocampal subfields command

2016-07-06 Thread Alexopoulos, Dimitrios
Thanks. Only for FS 6.0 and later, correct? Jim From: freesurfer-boun...@nmr.mgh.harvard.edu [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Iglesias, Eugenio Sent: Wednesday, July 06, 2016 9:47 AM To: Freesurfer support list Subject: Re: [Freesurfer] hippocampal subfields command

Re: [Freesurfer] hippocampal subfields command

2016-07-06 Thread Iglesias, Eugenio
Hi Jim, the latter command uses a new, higher resolution atlas based on ex vivo scans. Cheers, Eugenio Juan Eugenio Iglesias Translational Imaging Group University College London http://www.jeiglesias.com http://cmictig.cs.ucl.ac.uk/ On 6 Jul 2016, at 15:39, Alexopoulos, Dimitrios mailto:alexop

[Freesurfer] hippocampal subfields command

2016-07-06 Thread Alexopoulos, Dimitrios
A quick question re: hippocampal segmentation. I have processed 1mm isotropic T1 data with 5.3 using the following command: recon-all -qcache -all -hippo-subfields How is this this different than using the following command I have found here: https://surfer.nmr.mgh.harvard.edu/fswiki/Hippocamp