Re: [Freesurfer] having problem in running recon-all...

2006-08-07 Thread Nick Schmansky
Shahab, libgsl is included with the freesurfer distribution, and a path is setup to point to it when the freesurfer setup script is 'sourced'. What is displayed when you type: source $FREESURFER_HOME/SetUpFreeSurfer.csh GSL_DIR should be one of the lines. Switching to suse should not be a pr

[Freesurfer] having problem in running recon-all...

2006-08-06 Thread Shahabuddin Ansari
Hello,   I am having problem in running the following command:   recon-all -i 2996926_02.img -s 2996926_02 I used to run the command before without any problem. Recently my linux has been updated to suse version, would that be a source of problem. The console display the following error:   I